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pbluescript ii ks plasmid  (Agilent technologies)


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    Structured Review

    Agilent technologies pbluescript ii ks plasmid
    Pbluescript Ii Ks Plasmid, supplied by Agilent technologies, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/pbluescript+ii+ks+plasmid/pm38294527-49-18-22
    Average 90 stars, based on 1 article reviews
    pbluescript ii ks plasmid - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    Sequencing:

    Article Title: Development of Lentiviral Vectors Simultaneously Expressing Multiple siRNAs Against CCR5 , vif and tat/rev Genes for an HIV-1 Gene Therapy Approach
    Article Snippet: .. To obtain the shCCR5, the shvif and the scrambled sequence, two complementary DNA oligonucleotides flanked by Mlu I and Cla I sites were synthesized, annealed, and inserted at the EcoR V site of the pBluescript II KS plasmid (Stratagene, Agilent Technologies, Cernusco sul Naviglio Milan, Italy). ..

    Article Title: Mirk/Dyrk1B controls ventral spinal cord development via Shh pathway
    Article Snippet: For Sonic Hedgehog riboprobes, we cloned a cDNA fragment of 498 bp corresponding to the 5’-coding region of mSHH by applying PCR with Q5 High-Fidelity DNA Polymerase (New England Biolabs, M0491) in pCMV6-Entry plasmid, containing mShh coding region Myc-DDK-tagged (Mouse Sonic hedgehog NM_009170, ORIGENE, MR227201), and primers mSHHFOR: 5’-CCCAAGCTTGCCAGCGGCAGATAT-3’ and mSHHREV: 5’- CGGGAATTCGTCCTTCACCAGCTTG-3’. .. The PCR product of 498 bp, was then subcloned into the Hind III and EcoRI restriction sites of pBluescript II KS plasmid (Stratagene) and then subjected to Sanger Sequencing analysis for verification. .. Chicken eggs, provided by a local supplier, were incubated horizontally at 37 °C, with > 60–90% humidity until the desired Hamburger and Hamilton (HH) developmental stages for gain-and-loss-of-function and phenotype rescue experiments .

    Article Title: Mirk/Dyrk1B controls ventral spinal cord development via Shh pathway.
    Article Snippet: For Sonic Hedgehog riboprobes, we cloned a cDNA fragment of 498 bp corresponding to the 5’-coding region of mSHH by applying PCR with Q5 HighFidelity DNA Polymerase (New England Biolabs, M0491) in pCMV6-Entry plasmid, containing mShh coding region Myc-DDK-tagged (Mouse Sonic hedgehog NM_009170, ORIGENE, MR227201), and primers mSHHFOR: 5’-CCC AAG CTT GCC AGC GGC AGA TAT -3’ and mSHHREV: 5’- CGG GAA TTC GTC CTT CAC CAG CTT G-3’. .. The PCR product of 498 bp, was then subcloned into the Hind III and EcoRI restriction sites of pBluescript II KS plasmid (Stratagene) and then subjected to Sanger Sequencing analysis for verification. .. Chicken eggs, provided by a local supplier, were incubated horizontally at 37 °C, with > 60–90% humidity until the desired Hamburger and Hamilton (HH) developmental stages for gain-and-loss-of-function and phenotype rescue experiments.

    Synthesized:

    Article Title: Development of Lentiviral Vectors Simultaneously Expressing Multiple siRNAs Against CCR5 , vif and tat/rev Genes for an HIV-1 Gene Therapy Approach
    Article Snippet: .. To obtain the shCCR5, the shvif and the scrambled sequence, two complementary DNA oligonucleotides flanked by Mlu I and Cla I sites were synthesized, annealed, and inserted at the EcoR V site of the pBluescript II KS plasmid (Stratagene, Agilent Technologies, Cernusco sul Naviglio Milan, Italy). ..

    Plasmid Preparation:

    Article Title: Development of Lentiviral Vectors Simultaneously Expressing Multiple siRNAs Against CCR5 , vif and tat/rev Genes for an HIV-1 Gene Therapy Approach
    Article Snippet: .. To obtain the shCCR5, the shvif and the scrambled sequence, two complementary DNA oligonucleotides flanked by Mlu I and Cla I sites were synthesized, annealed, and inserted at the EcoR V site of the pBluescript II KS plasmid (Stratagene, Agilent Technologies, Cernusco sul Naviglio Milan, Italy). ..

    Article Title: Combined magnetic tweezers and micro-mirror total internal reflection fluorescence microscope for single molecule manipulation and visualization
    Article Snippet: 2.1.6 DNA tethering Anti-digoxigenin, polyclonal (11333089001, Roche) 1X Phosphate buffered saline (PBS) Trizma base NaCl Products from DNA ligation reaction Bovine serum albumin (BSA) Tween-20 Magnetic beads (Dynabeads MyOne Streptavidin T1; 35601, Invitrogen) Wash buffer (WB): 1x PBS, 0.1% w/v BSA, 0.01% v/v Tween-20 Bead wash buffer (BWB): 10 mM Tris (pH 7.5), 1 M NaCl 2.1.7 TIRF calibration Biotinylated fluorescent nanodiamonds ( e.g. Adamas Nanodiamonds) 2.1.8 General supplies 200 μl thin-wall PCR tubes 1.5 ml Eppendorf tubes .. pET28b plasmid (EMD4Biosciences) pBluescript II KS plasmid (Stratagene) ..

    Article Title: Expression of Xanthophyllomyces dendrorhous cytochrome-P450 hydroxylase and reductase in Mucor circinelloides.
    Article Snippet: Carotenoids are natural pigments that act as powerful antioxidants and have various beneficial effects on human and animal health.. Mucor circinelloides (Mucoromycotina) is a carotenoid producing zygomycetes fungus, which accumulates b-carotene as the main carotenoid but also able to produce the hydroxylated derivatives of b-carotene (i.e. zeaxanthin and b-cryptoxanthin) in low amount.. These xanthophylls, together with the ketolated derivatives of b-carotene (such as canthaxanthin, echinenone and astaxanthin) have better antioxidant activity than b-carotene.

    Article Title: Mirk/Dyrk1B controls ventral spinal cord development via Shh pathway
    Article Snippet: For Sonic Hedgehog riboprobes, we cloned a cDNA fragment of 498 bp corresponding to the 5’-coding region of mSHH by applying PCR with Q5 High-Fidelity DNA Polymerase (New England Biolabs, M0491) in pCMV6-Entry plasmid, containing mShh coding region Myc-DDK-tagged (Mouse Sonic hedgehog NM_009170, ORIGENE, MR227201), and primers mSHHFOR: 5’-CCCAAGCTTGCCAGCGGCAGATAT-3’ and mSHHREV: 5’- CGGGAATTCGTCCTTCACCAGCTTG-3’. .. The PCR product of 498 bp, was then subcloned into the Hind III and EcoRI restriction sites of pBluescript II KS plasmid (Stratagene) and then subjected to Sanger Sequencing analysis for verification. .. Chicken eggs, provided by a local supplier, were incubated horizontally at 37 °C, with > 60–90% humidity until the desired Hamburger and Hamilton (HH) developmental stages for gain-and-loss-of-function and phenotype rescue experiments .

    Article Title: Mirk/Dyrk1B controls ventral spinal cord development via Shh pathway
    Article Snippet: .. For in situ hybridization (ISH) experiments, we used a cDNA fragment of 253 bp corresponding to the 3’-coding region of cDyrk1B cDNA, a cDNA fragment of 396 bp corresponding to the 3’-coding region of mDyrk1B cDNA, both of them subcloned into the Hind III and EcoRI restriction sites of pBluescript II KS plasmid (Stratagene). .. For Sonic Hedgehog riboprobes, we cloned a cDNA fragment of 498 bp corresponding to the 5’-coding region of mSHH by applying PCR with Q5 High-Fidelity DNA Polymerase (New England Biolabs, M0491) in pCMV6-Entry plasmid, containing mShh coding region Myc-DDK-tagged (Mouse Sonic hedgehog NM_009170, ORIGENE, MR227201), and primers mSHHFOR: 5’-CCCAAGCTTGCCAGCGGCAGATAT-3’ and mSHHREV: 5’- CGGGAATTCGTCCTTCACCAGCTTG-3’.

    Article Title: Beta-actin and RPS21 promoters and uses thereof
    Article Snippet: .. These were subsequently cloned into pBluescript II KS plasmid (Stratagene). .. The 7 kb AvrII fragment has the ATCC Reference No. PTA-5309, deposited Jul.

    Article Title: Analysis of the 9p21.3 sequence associated with coronary artery disease reveals a tendency for duplication in a CAD patient
    Article Snippet: .. In parallel, the primers B635 and B629 ( ) were used to PCR amplify the pBlueScript II KS plasmid (Stratagene) and add a polylinker. ..

    Article Title: Mirk/Dyrk1B controls ventral spinal cord development via Shh pathway.
    Article Snippet: For Sonic Hedgehog riboprobes, we cloned a cDNA fragment of 498 bp corresponding to the 5’-coding region of mSHH by applying PCR with Q5 HighFidelity DNA Polymerase (New England Biolabs, M0491) in pCMV6-Entry plasmid, containing mShh coding region Myc-DDK-tagged (Mouse Sonic hedgehog NM_009170, ORIGENE, MR227201), and primers mSHHFOR: 5’-CCC AAG CTT GCC AGC GGC AGA TAT -3’ and mSHHREV: 5’- CGG GAA TTC GTC CTT CAC CAG CTT G-3’. .. The PCR product of 498 bp, was then subcloned into the Hind III and EcoRI restriction sites of pBluescript II KS plasmid (Stratagene) and then subjected to Sanger Sequencing analysis for verification. .. Chicken eggs, provided by a local supplier, were incubated horizontally at 37 °C, with > 60–90% humidity until the desired Hamburger and Hamilton (HH) developmental stages for gain-and-loss-of-function and phenotype rescue experiments.

    Expressing:

    Article Title: Expression of Xanthophyllomyces dendrorhous cytochrome-P450 hydroxylase and reductase in Mucor circinelloides.
    Article Snippet: Carotenoids are natural pigments that act as powerful antioxidants and have various beneficial effects on human and animal health.. Mucor circinelloides (Mucoromycotina) is a carotenoid producing zygomycetes fungus, which accumulates b-carotene as the main carotenoid but also able to produce the hydroxylated derivatives of b-carotene (i.e. zeaxanthin and b-cryptoxanthin) in low amount.. These xanthophylls, together with the ketolated derivatives of b-carotene (such as canthaxanthin, echinenone and astaxanthin) have better antioxidant activity than b-carotene.

    Transformation Assay:

    Article Title: Expression of Xanthophyllomyces dendrorhous cytochrome-P450 hydroxylase and reductase in Mucor circinelloides.
    Article Snippet: Carotenoids are natural pigments that act as powerful antioxidants and have various beneficial effects on human and animal health.. Mucor circinelloides (Mucoromycotina) is a carotenoid producing zygomycetes fungus, which accumulates b-carotene as the main carotenoid but also able to produce the hydroxylated derivatives of b-carotene (i.e. zeaxanthin and b-cryptoxanthin) in low amount.. These xanthophylls, together with the ketolated derivatives of b-carotene (such as canthaxanthin, echinenone and astaxanthin) have better antioxidant activity than b-carotene.

    Amplification:

    Article Title: Expression of Xanthophyllomyces dendrorhous cytochrome-P450 hydroxylase and reductase in Mucor circinelloides.
    Article Snippet: Carotenoids are natural pigments that act as powerful antioxidants and have various beneficial effects on human and animal health.. Mucor circinelloides (Mucoromycotina) is a carotenoid producing zygomycetes fungus, which accumulates b-carotene as the main carotenoid but also able to produce the hydroxylated derivatives of b-carotene (i.e. zeaxanthin and b-cryptoxanthin) in low amount.. These xanthophylls, together with the ketolated derivatives of b-carotene (such as canthaxanthin, echinenone and astaxanthin) have better antioxidant activity than b-carotene.

    Clone Assay:

    Article Title: Expression of Xanthophyllomyces dendrorhous cytochrome-P450 hydroxylase and reductase in Mucor circinelloides.
    Article Snippet: Carotenoids are natural pigments that act as powerful antioxidants and have various beneficial effects on human and animal health.. Mucor circinelloides (Mucoromycotina) is a carotenoid producing zygomycetes fungus, which accumulates b-carotene as the main carotenoid but also able to produce the hydroxylated derivatives of b-carotene (i.e. zeaxanthin and b-cryptoxanthin) in low amount.. These xanthophylls, together with the ketolated derivatives of b-carotene (such as canthaxanthin, echinenone and astaxanthin) have better antioxidant activity than b-carotene.

    Article Title: Beta-actin and RPS21 promoters and uses thereof
    Article Snippet: .. These were subsequently cloned into pBluescript II KS plasmid (Stratagene). .. The 7 kb AvrII fragment has the ATCC Reference No. PTA-5309, deposited Jul.

    Polymerase Chain Reaction:

    Article Title: Mirk/Dyrk1B controls ventral spinal cord development via Shh pathway
    Article Snippet: For Sonic Hedgehog riboprobes, we cloned a cDNA fragment of 498 bp corresponding to the 5’-coding region of mSHH by applying PCR with Q5 High-Fidelity DNA Polymerase (New England Biolabs, M0491) in pCMV6-Entry plasmid, containing mShh coding region Myc-DDK-tagged (Mouse Sonic hedgehog NM_009170, ORIGENE, MR227201), and primers mSHHFOR: 5’-CCCAAGCTTGCCAGCGGCAGATAT-3’ and mSHHREV: 5’- CGGGAATTCGTCCTTCACCAGCTTG-3’. .. The PCR product of 498 bp, was then subcloned into the Hind III and EcoRI restriction sites of pBluescript II KS plasmid (Stratagene) and then subjected to Sanger Sequencing analysis for verification. .. Chicken eggs, provided by a local supplier, were incubated horizontally at 37 °C, with > 60–90% humidity until the desired Hamburger and Hamilton (HH) developmental stages for gain-and-loss-of-function and phenotype rescue experiments .

    Article Title: Analysis of the 9p21.3 sequence associated with coronary artery disease reveals a tendency for duplication in a CAD patient
    Article Snippet: .. In parallel, the primers B635 and B629 ( ) were used to PCR amplify the pBlueScript II KS plasmid (Stratagene) and add a polylinker. ..

    Article Title: Mirk/Dyrk1B controls ventral spinal cord development via Shh pathway.
    Article Snippet: For Sonic Hedgehog riboprobes, we cloned a cDNA fragment of 498 bp corresponding to the 5’-coding region of mSHH by applying PCR with Q5 HighFidelity DNA Polymerase (New England Biolabs, M0491) in pCMV6-Entry plasmid, containing mShh coding region Myc-DDK-tagged (Mouse Sonic hedgehog NM_009170, ORIGENE, MR227201), and primers mSHHFOR: 5’-CCC AAG CTT GCC AGC GGC AGA TAT -3’ and mSHHREV: 5’- CGG GAA TTC GTC CTT CAC CAG CTT G-3’. .. The PCR product of 498 bp, was then subcloned into the Hind III and EcoRI restriction sites of pBluescript II KS plasmid (Stratagene) and then subjected to Sanger Sequencing analysis for verification. .. Chicken eggs, provided by a local supplier, were incubated horizontally at 37 °C, with > 60–90% humidity until the desired Hamburger and Hamilton (HH) developmental stages for gain-and-loss-of-function and phenotype rescue experiments.

    In Situ Hybridization:

    Article Title: Mirk/Dyrk1B controls ventral spinal cord development via Shh pathway
    Article Snippet: .. For in situ hybridization (ISH) experiments, we used a cDNA fragment of 253 bp corresponding to the 3’-coding region of cDyrk1B cDNA, a cDNA fragment of 396 bp corresponding to the 3’-coding region of mDyrk1B cDNA, both of them subcloned into the Hind III and EcoRI restriction sites of pBluescript II KS plasmid (Stratagene). .. For Sonic Hedgehog riboprobes, we cloned a cDNA fragment of 498 bp corresponding to the 5’-coding region of mSHH by applying PCR with Q5 High-Fidelity DNA Polymerase (New England Biolabs, M0491) in pCMV6-Entry plasmid, containing mShh coding region Myc-DDK-tagged (Mouse Sonic hedgehog NM_009170, ORIGENE, MR227201), and primers mSHHFOR: 5’-CCCAAGCTTGCCAGCGGCAGATAT-3’ and mSHHREV: 5’- CGGGAATTCGTCCTTCACCAGCTTG-3’.



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    Image Search Results


    LJ3402 prevents hepatic senescence and mitochondrial dysfunction in aged mice. (A) Representative images of hematoxylin and eosin (H&E) (top), SA‐β‐gal (middle), and Oil Red O (bottom) staining on frozen liver sections from the indicated group. (B) The mRNA levels of marker genes involved in senescence ( p16 , p21 , p53 ) and protein levels (γH2AX, p21, p53) in the liver of young and aged mice were determined by RT‐qPCR or immunoblotting ( n = 3; three randomly selected samples per group). (C) Expression of marker genes involved in lipid metabolism ( Srebp1c , Pparα , Cpt1 ) and mitochondrial homeostasis ( Sirt1 , Pgc‐1α , NRF1 , TFAM ) in the liver was determined using RT‐qPCR. (D) Hepatic triglyceride (TG), total cholesterol (TC), and free fatty acid (FFA), and (E) plasma levels of alanine aminotransferase (ALT) and aspartate aminotransferase (AST) ( n = 5; three randomly selected samples per group). (F) Livers separated from mice were incubated in culture medium, and the media were collected after 12 h and 24 h of incubation; the concentrations of TNF‐α and IL‐1β in the media were measured ( n = 5; three randomly selected samples per group). All data are presented as the mean ± SEM. * p < 0.05 and ** p < 0.01. Different lowercase letters above the bars indicate statistically significant differences ( p < 0.05).

    Journal: Biofactors (Oxford, England)

    Article Title: Lactobacillus johnsonii JNU3402 Ameliorates Age‐Related Liver Dysfunction Through Stimulating PGC ‐1α‐Mediated SIRT1 Expression

    doi: 10.1002/biof.70069

    Figure Lengend Snippet: LJ3402 prevents hepatic senescence and mitochondrial dysfunction in aged mice. (A) Representative images of hematoxylin and eosin (H&E) (top), SA‐β‐gal (middle), and Oil Red O (bottom) staining on frozen liver sections from the indicated group. (B) The mRNA levels of marker genes involved in senescence ( p16 , p21 , p53 ) and protein levels (γH2AX, p21, p53) in the liver of young and aged mice were determined by RT‐qPCR or immunoblotting ( n = 3; three randomly selected samples per group). (C) Expression of marker genes involved in lipid metabolism ( Srebp1c , Pparα , Cpt1 ) and mitochondrial homeostasis ( Sirt1 , Pgc‐1α , NRF1 , TFAM ) in the liver was determined using RT‐qPCR. (D) Hepatic triglyceride (TG), total cholesterol (TC), and free fatty acid (FFA), and (E) plasma levels of alanine aminotransferase (ALT) and aspartate aminotransferase (AST) ( n = 5; three randomly selected samples per group). (F) Livers separated from mice were incubated in culture medium, and the media were collected after 12 h and 24 h of incubation; the concentrations of TNF‐α and IL‐1β in the media were measured ( n = 5; three randomly selected samples per group). All data are presented as the mean ± SEM. * p < 0.05 and ** p < 0.01. Different lowercase letters above the bars indicate statistically significant differences ( p < 0.05).

    Article Snippet: The pBluescript II KS(+)‐p21 promoter‐luc plasmid was purchased from Addgene (MA, USA) and designated as p21 promoter‐luc.

    Techniques: Staining, Marker, Quantitative RT-PCR, Western Blot, Expressing, Clinical Proteomics, Incubation

    SIRT1 modulates LJ3402‐mediated suppression of p53 function in senescent AML12 hepatocytes. (A) Acetylation of p53 after 5 days of treatment with LJ3402‐CM (LJ‐CM) and 50 μM sirtinol during H 2 O 2 ‐induced senescence. (A, C–I) Senescence of AML12 hepatocytes was induced by 1 mM or 750 μM H 2 O 2 for 1 h per day for 7 days. LJ‐CM, 50 μM sirtinol, or 20 μM PFTα were added on days 3–7 during H 2 O 2 exposure. (B) Luciferase reporter activity in HEK293T cells transfected with a reporter plasmid ( p21 promoter–luc) and a p53 expression plasmid. Twelve hours after transfection, cells were treated with LJ‐CM and 50 μM sirtinol for 24 h with or without 100 μM H 2 O 2 . (C) The mRNA and protein levels of p21, p53, PGC‐1α, and SIRT1 measured by RT‐qPCR and immunoblotting, respectively. (D) SA‐β‐gal staining. (E) mRNA levels of genes involved in mitochondrial biogenesis ( NRF1 and TFAM ) and oxidant defense ( CAT and SOD ). (F) ROS levels. (G) Oxygen consumption rates (OCRs) measured at baseline and after treatment with 2.5 μM oligomycin, 1 μM FCCP, or 1 μM rotenone/antimycin A. (H) Oil Red O staining. (I) Intracellular TG levels in senescent AML12 hepatocytes treated with LJ‐CM, sirtinol, and PFTα. All data are presented as the mean ± SEM. Different lowercase letters above the bars indicate statistically significant differences ( p < 0.05).

    Journal: Biofactors (Oxford, England)

    Article Title: Lactobacillus johnsonii JNU3402 Ameliorates Age‐Related Liver Dysfunction Through Stimulating PGC ‐1α‐Mediated SIRT1 Expression

    doi: 10.1002/biof.70069

    Figure Lengend Snippet: SIRT1 modulates LJ3402‐mediated suppression of p53 function in senescent AML12 hepatocytes. (A) Acetylation of p53 after 5 days of treatment with LJ3402‐CM (LJ‐CM) and 50 μM sirtinol during H 2 O 2 ‐induced senescence. (A, C–I) Senescence of AML12 hepatocytes was induced by 1 mM or 750 μM H 2 O 2 for 1 h per day for 7 days. LJ‐CM, 50 μM sirtinol, or 20 μM PFTα were added on days 3–7 during H 2 O 2 exposure. (B) Luciferase reporter activity in HEK293T cells transfected with a reporter plasmid ( p21 promoter–luc) and a p53 expression plasmid. Twelve hours after transfection, cells were treated with LJ‐CM and 50 μM sirtinol for 24 h with or without 100 μM H 2 O 2 . (C) The mRNA and protein levels of p21, p53, PGC‐1α, and SIRT1 measured by RT‐qPCR and immunoblotting, respectively. (D) SA‐β‐gal staining. (E) mRNA levels of genes involved in mitochondrial biogenesis ( NRF1 and TFAM ) and oxidant defense ( CAT and SOD ). (F) ROS levels. (G) Oxygen consumption rates (OCRs) measured at baseline and after treatment with 2.5 μM oligomycin, 1 μM FCCP, or 1 μM rotenone/antimycin A. (H) Oil Red O staining. (I) Intracellular TG levels in senescent AML12 hepatocytes treated with LJ‐CM, sirtinol, and PFTα. All data are presented as the mean ± SEM. Different lowercase letters above the bars indicate statistically significant differences ( p < 0.05).

    Article Snippet: The pBluescript II KS(+)‐p21 promoter‐luc plasmid was purchased from Addgene (MA, USA) and designated as p21 promoter‐luc.

    Techniques: Luciferase, Activity Assay, Transfection, Plasmid Preparation, Expressing, Quantitative RT-PCR, Western Blot, Staining

    Necdin regulates p53 acetylation and activity by releasing p300 from p53. ( A , B ) Reporter gene analysis using p21-promoter–Luc and the indicated expression plasmids in HEK293T cells treated with 100 μM H 2 O 2 , 50 μM sirtinol, and LKU4–CM for 24 h. ( C ) Immunoprecipitation (IP) analyses of p53 and p300 in HEK293T cells transfected with p53, p300, and NDN expression plasmids with or without LKU4–CM treatment for 24 h. ( D ) p53 acetylation in day 8 3T3-L1 adipocytes transfected with the indicated plasmids and treated with LKU4–CM for 24 h. Cells were immunoprecipitated using an anti-p53 antibody. ( E ) Chromatin immunoprecipitation (ChIP) assay using anti-p53 and anti-p300 antibodies in day 6 3T3-L1 adipocytes transfected with p53, p300, and NDN, and treated with LKU4–CM for 24 h. ( F ) mRNA and protein levels of p21 in 3T3-L1 adipocytes transfected with p300 and NDN expression plasmids and treated with LKU4–CM for 24 h. The lowercase letters above the graphs indicate statistical significance at p < 0.05.

    Journal: Aging (Albany NY)

    Article Title: Lactobacillus amylovorus KU4 inhibits adipocyte senescence in aged mice through necdin regulation of p53 activity

    doi: 10.18632/aging.206314

    Figure Lengend Snippet: Necdin regulates p53 acetylation and activity by releasing p300 from p53. ( A , B ) Reporter gene analysis using p21-promoter–Luc and the indicated expression plasmids in HEK293T cells treated with 100 μM H 2 O 2 , 50 μM sirtinol, and LKU4–CM for 24 h. ( C ) Immunoprecipitation (IP) analyses of p53 and p300 in HEK293T cells transfected with p53, p300, and NDN expression plasmids with or without LKU4–CM treatment for 24 h. ( D ) p53 acetylation in day 8 3T3-L1 adipocytes transfected with the indicated plasmids and treated with LKU4–CM for 24 h. Cells were immunoprecipitated using an anti-p53 antibody. ( E ) Chromatin immunoprecipitation (ChIP) assay using anti-p53 and anti-p300 antibodies in day 6 3T3-L1 adipocytes transfected with p53, p300, and NDN, and treated with LKU4–CM for 24 h. ( F ) mRNA and protein levels of p21 in 3T3-L1 adipocytes transfected with p300 and NDN expression plasmids and treated with LKU4–CM for 24 h. The lowercase letters above the graphs indicate statistical significance at p < 0.05.

    Article Snippet: Plasmids, pBluescript II KS (+)–p21 promoter Luc (p21-promoter–Luc), were purchased from Addgene (Watertown, MA, USA). pCDNA3–p53 and pCDNA3–p300 were transfected into HEK293T cells, 3T3-L1 adipocytes or primary adipocytes. pCDNA3–NDN was constructed for a previous study.

    Techniques: Activity Assay, Expressing, Immunoprecipitation, Transfection, Chromatin Immunoprecipitation

    LKU4 negatively regulates H 2 O 2 -induced adipocyte senescence through NDN upregulation. ( A ) Reporter gene analysis using p21-promoter–Luc in HEK293T cells. ( B – G ) γH2AX, p53, p21, and NDN protein expression ( B ), SA-β-gal staining (scale bars, 200 μm) ( C ), RT-qPCR analysis of SASP genes ( D ) and mitochondrial function-associated genes ( E ), ROS levels ( F ), mtDNA copy number and CS activity ( G ) in primary adipocytes. Primary adipocytes differentiated from SVF cells were transfected with expression plasmids and NDN siRNA for 12 h, followed by treatment with 100 μM H 2 O 2 , 50 μM sirtinol, and LKU4–CM for another 24 h, as indicated, before analysis. ( H ) Oxygen consumption rate (OCR) analysis using a Seahorse XFe analyzer in 3T3-L1 adipocytes overexpressing the indicated expression plasmids in the absence or presence of LKU4–CM. ( I ) Intracellular TG levels in primary adipocytes. Differentiated primary adipocytes were transfected with expression plasmids and NDN siRNA and then treated with 100 μM H 2 O 2 , 50 μM sirtinol, and LKU4–CM, as indicated.

    Journal: Aging (Albany NY)

    Article Title: Lactobacillus amylovorus KU4 inhibits adipocyte senescence in aged mice through necdin regulation of p53 activity

    doi: 10.18632/aging.206314

    Figure Lengend Snippet: LKU4 negatively regulates H 2 O 2 -induced adipocyte senescence through NDN upregulation. ( A ) Reporter gene analysis using p21-promoter–Luc in HEK293T cells. ( B – G ) γH2AX, p53, p21, and NDN protein expression ( B ), SA-β-gal staining (scale bars, 200 μm) ( C ), RT-qPCR analysis of SASP genes ( D ) and mitochondrial function-associated genes ( E ), ROS levels ( F ), mtDNA copy number and CS activity ( G ) in primary adipocytes. Primary adipocytes differentiated from SVF cells were transfected with expression plasmids and NDN siRNA for 12 h, followed by treatment with 100 μM H 2 O 2 , 50 μM sirtinol, and LKU4–CM for another 24 h, as indicated, before analysis. ( H ) Oxygen consumption rate (OCR) analysis using a Seahorse XFe analyzer in 3T3-L1 adipocytes overexpressing the indicated expression plasmids in the absence or presence of LKU4–CM. ( I ) Intracellular TG levels in primary adipocytes. Differentiated primary adipocytes were transfected with expression plasmids and NDN siRNA and then treated with 100 μM H 2 O 2 , 50 μM sirtinol, and LKU4–CM, as indicated.

    Article Snippet: Plasmids, pBluescript II KS (+)–p21 promoter Luc (p21-promoter–Luc), were purchased from Addgene (Watertown, MA, USA). pCDNA3–p53 and pCDNA3–p300 were transfected into HEK293T cells, 3T3-L1 adipocytes or primary adipocytes. pCDNA3–NDN was constructed for a previous study.

    Techniques: Expressing, Staining, Quantitative RT-PCR, Activity Assay, Transfection

    KEY RESOURCES TABLE

    Journal: Cell reports

    Article Title: DDX50 cooperates with STAU1 to effect stabilization of pro-differentiation RNAs

    doi: 10.1016/j.celrep.2024.115174

    Figure Lengend Snippet: KEY RESOURCES TABLE

    Article Snippet: pBluescript II KS (+) , Addgene , Cat#212207.

    Techniques: Virus, Recombinant, Protease Inhibitor, Staining, Labeling, SYBR Green Assay, Bradford Assay, Magnetic Beads, In Situ, Microscopy, Purification, Gel Extraction, cDNA Synthesis, Kinase Assay, Gene Expression, Plasmid Preparation, Software